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(Navigating draggin and zoom)
(Zooming)
 
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The visualization plugin offers a set of functionalities to allow the user to interact with the layout.
 
The visualization plugin offers a set of functionalities to allow the user to interact with the layout.
  
== Navigating draggin and zoom ==
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= Navigating draggin and zoom =
  
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=== Navigation ===
 
It is possible to navigate the layout by pressing the <b>right mouse button</b> and move the view arround.
 
It is possible to navigate the layout by pressing the <b>right mouse button</b> and move the view arround.
  
If a node is fixed it is possible to drag it to a new position. Simply press the <b>left mouse button</b> and drag the node to the desired position(see more about dragging, fixed and unfixed nodes [[Layout:Edition|here]].
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=== Zooming ===
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Zooming is possible using the <b>mouse wheel</b> or alternatively using the <b>Zoom Panel</b> in the right panel of the visualizer interface (more about the interface [[Layout:GUI|here]]).
  
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=== Dragging ===
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If a node is fixed it is possible to drag it to a new position. Simply press the <b>left mouse button</b> and drag the node to the desired position(see more about dragging, fixed and unfixed nodes [[Layout:Edition|here]]).
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=== Highlight ===
 
It is possible to highlight nodes by hovering the mouse cursor on them.
 
It is possible to highlight nodes by hovering the mouse cursor on them.
  
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<br>
 
<br>
  
Zooming is possible using the <b>mouse wheel</b> or alternatively using the <b>Zoom Panel</b> in the right panel of the visualizer (more about the interface [[Layout:GUI|here]]),
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= Preferences =
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Using the Preferences menu accessible through the Help -> Preferences menu and selecting Visualization in the tree, the user can edit several properties of the network such as colors, shapes and fonts of the nodes.
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<br>
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[[Image: Preferences.png|350px]]
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[[Image: Preferences2.png|550px]]

Latest revision as of 19:10, 27 May 2014


The visualization plugin offers a set of functionalities to allow the user to interact with the layout.

Navigating draggin and zoom[edit]

Navigation[edit]

It is possible to navigate the layout by pressing the right mouse button and move the view arround.

Zooming[edit]

Zooming is possible using the mouse wheel or alternatively using the Zoom Panel in the right panel of the visualizer interface (more about the interface here).

Dragging[edit]

If a node is fixed it is possible to drag it to a new position. Simply press the left mouse button and drag the node to the desired position(see more about dragging, fixed and unfixed nodes here).

Highlight[edit]

It is possible to highlight nodes by hovering the mouse cursor on them.

If the node is a metabolite node, all nodes that represent the same compound will be highlighted as well.
M highlight.png

If the node is a reaction, all the metabolites and edges that compose that reaction will be highlighted.
R highlight.png

Preferences[edit]

Using the Preferences menu accessible through the Help -> Preferences menu and selecting Visualization in the tree, the user can edit several properties of the network such as colors, shapes and fonts of the nodes.


Preferences.png

Preferences2.png